Gene | Calcb |
Chromosome | 7 |
Deletion Start | 114,719,726 |
Deletion End | 114,722,137 |
Deletion Size | 2,412 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 114,720,148 | 114,720,170 | TGCAGGACTATGAGCAGATGAAG |
TUP | 114,720,173 | 114,720,199 | TCTTGCTCCTCCTGTTCCAGCTTCCTG |
TUR | 114,720,202 | 114,720,223 | GAGACTTACCGGGAGCCCTTAG |
TDF | 114,721,317 | 114,721,337 | TCTGTTGCGTGTGCATTTCTC |
TDP | 114,721,344 | 114,721,370 | CCGACACACTAAAGCTGCTGTTGCCAG |
TDR | 114,721,372 | 114,721,391 | CCACTCTGGGCCACTGATTC |
PCR Primers
Primer | Sequence |
SU | TTTCTTCACAGATGAGAG |
SD | AGCTGGGCCCATGTGTGAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 384 bp | - | + | + |
TUF | TUR | 76 bp | + | + | - |
TDF | TDR | 75 bp | + | + | - |
NeoFwd | SD | 396 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10064A-A10 | VGB6 | C57BL/6NTac | |
10064A-B12 | VGB6 | C57BL/6NTac | |
10064A-D11 | VGB6 | C57BL/6NTac | |
10064A-F2 | VGB6 | C57BL/6NTac | |
10064A-H3 | VGB6 | C57BL/6NTac | |
10064A-H7 | VGB6 | C57BL/6NTac | |