| Gene | Adig |
| Chromosome | 2 |
| Deletion Start | 158,502,726 |
| Deletion End | 158,505,907 |
| Deletion Size | 3,182 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 158,502,817 | 158,502,837 | GGCTTTGCTGCTGTTCTTGAC |
| TUP | 158,502,865 | 158,502,890 | ATCCAGCCTGAACCAGCTCACCTTGA |
| TUR | 158,502,892 | 158,502,912 | CCTGCCCAGCTCCAAAATTAG |
| TDF | 158,505,683 | 158,505,703 | GGTCTCATACAGGGCCACATG |
| TDP | 158,505,709 | 158,505,733 | CAGGCTTGGCACATGTCTCCTCTGG |
| TDR | 158,505,744 | 158,505,764 | GGGTGGGAACAGCCTGTAGTG |
PCR Primers
| Primer | Sequence |
| SU | TGACTCCTGGGTCAGGCCAGC |
| SD | ATGTTCCAAAAACCCAGATC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | 375 bp | - | + | + |
| TUF | TUR | 96 bp | + | + | - |
| TDF | TDR | 82 bp | + | + | - |
| NeoFwd | SD | 347 bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 10117A-B1 | VGB6 | C57BL/6NTac | |
| 10117A-B5 | VGB6 | C57BL/6NTac | |
| 10117A-E3 | VGB6 | C57BL/6NTac | |