Gene | Uap1l1 |
Chromosome | 2 |
Deletion Start | 25,365,612 |
Deletion End | 25,361,625 |
Deletion Size | 3,988 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 25,365,255 | 25,365,276 | CCGGAAGAGTTAGAGCCTATGG |
TUP | 25,365,207 | 25,365,230 | CACTTCCCGAGTCCGTGTCCTCCA |
TUR | 25,365,157 | 25,365,181 | GGTTACTAGGCACAGGAGGAAGAAG |
TDF | 25,362,148 | 25,362,168 | GAGGTAGGTGCTGACCATTGC |
TDP | 25,362,109 | 25,362,131 | CCCAAATGGAGACCCTCCAGCCA |
TDR | 25,362,084 | 25,362,103 | GACACCAAGGGCGAGATCTC |
PCR Primers
Primer | Sequence |
SU | CAGAACAGTTTTATTCACGTG |
SD | TAGACAGACAATCAGAGTCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 455 bp | - | + | + |
TUF | TUR | 120 bp | + | + | - |
TDF | TDR | 85 bp | + | + | - |
NeoFwd | SD | 253 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10169A-E7 | VGB6 | C57BL/6NTac | |
10169B-H7 | VGB6 | C57BL/6NTac | |
10169B-B7 | VGB6 | C57BL/6NTac | |