Gene | Lcn12 |
Chromosome | 2 |
Deletion Start | 25,493,853 |
Deletion End | 25,490,905 |
Deletion Size | 2,949 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 25,493,762 | 25,493,782 | TCAAGGCTTTCCCCAGATGAC |
TUP | 25,493,732 | 25,493,760 | AAGCCCTGTACCTGGTCACTTTGGAAGCT |
TUR | 25,493,706 | 25,493,725 | GCTGCCACCTGCTTCTTCTC |
TDF | 25,491,091 | 25,491,111 | TGCCACTCTACAGGGCATGTC |
TDP | 25,491,065 | 25,491,086 | AAACCCCTCCCTGCAGCCGCTT |
TDR | 25,491,037 | 25,491,059 | TGGAAGTTAGGCAGGGAGATGAG |
PCR Primers
Primer | Sequence |
SU | GTTGGGTCCAGTAAGTTTTC |
SD | GTCCATTATGTCCACCTTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 341 bp | - | + | + |
TUF | TUR | 77 bp | + | + | - |
TDF | TDR | 75 bp | + | + | - |
NeoFwd | SD | 321 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10188A-A11 | VGB6 | C57BL/6NTac | |
10188A-C7 | VGB6 | C57BL/6NTac | |
10188A-G8 | VGB6 | C57BL/6NTac | |
10188A-H12 | VGB6 | C57BL/6NTac | |