Gene | Slc2a6 |
Chromosome | 2 |
Deletion Start | 27,027,902 |
Deletion End | 27,021,895 |
Deletion Size | 6,008 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 27,027,232 | 27,027,253 | GCAATTTCAGCTTTGGGTATGC |
TUP | 27,027,194 | 27,027,222 | CACATCTCCAGTCATCCCTGAACTGAAGC |
TUR | 27,027,170 | 27,027,192 | GGTGTAGTGCTGGGTCAGAAGAG |
TDF | 27,022,370 | 27,022,388 | TCCCAGGGAAATGCAGATG |
TDP | 27,022,340 | 27,022,365 | AGCAATAAGCTGGAACCTGCCCTGCC |
TDR | 27,022,317 | 27,022,335 | CTCTCAACCGTGGCCATTG |
PCR Primers
Primer | Sequence |
SU | TAAAGCCAGACCCAGCCATG |
SD | GCCTGCTCCCCCTGCAGATC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 430 bp | - | + | + |
TUF | TUR | 84 bp | + | + | - |
TDF | TDR | 72 bp | + | + | - |
NeoFwd | SD | 282 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10195A-D11 | VGB6 | C57BL/6NTac | |
10195A-E12 | VGB6 | C57BL/6NTac | |