| Gene | Snrnp25 |
| Chromosome | 11 |
| Deletion Start | 32,205,625 |
| Deletion End | 32,208,742 |
| Deletion Size | 3,118 |
| Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | CAGTCCATTATCATCAAGGCAAGAG |
| TUP | | | CCATGCCTGCCTAGATGCTGCCAT |
| TUR | | | CATCCTTGCTGCCAATATTCTG |
| TDF | | | GTTCTCACAGCAGCCCACATG |
| TDP | | | TGGCCACACTCTTCTCCCACCTCACCT |
| TDR | | | AGTAGGGATCAGGAACAATCAAGTG |
PCR Primers
| Primer | Sequence |
| SU | GGCGGGACACAATCACTGCG |
| SD | ACAGAGTACTATGGCTTTCTG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 10228A-A4 | VGB6 | C57BL/6NTac | |
| 10228A-C7 | VGB6 | C57BL/6NTac | |
| 10228A-G4 | VGB6 | C57BL/6NTac | |
| 10228B-E9 | VGB6 | C57BL/6NTac | |
| 10228B-G9 | VGB6 | C57BL/6NTac | |
| 10228B-H2 | VGB6 | C57BL/6NTac | |
