Gene | BC100451 |
Chromosome | 11 |
Deletion Start | 118,334,013 |
Deletion End | 118,332,391 |
Deletion Size | 1,623 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 118,333,910 | 118,333,928 | CAGCCCAAGAGGAGGACAG |
TUP | 118,333,882 | 118,333,906 | CACTCTGCAGCAGTGGAAAGCACGG |
TUR | 118,333,839 | 118,333,860 | CCTGCCACTCTGCCTTTAACTC |
TDF | 118,332,829 | 118,332,848 | CGCCCAAGTCACCTTTGTTG |
TDP | 118,332,800 | 118,332,824 | ACGAAAGCCTCAAGCCTTACCTGCA |
TDR | 118,332,779 | 118,332,799 | GCTACAGAGTCTGCCTGTTTC |
PCR Primers
Primer | Sequence |
SU | AGTGGGCAGAGGTTGGGGAG |
SD | CTGGGGTTTCCATGAGTCCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 341 bp | - | + | + |
TUF | TUR | 90 bp | + | + | - |
TDF | TDR | 70 bp | + | + | - |
NeoFwd | SD | 281 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10296A-G2 | VGB6 | C57BL/6NTac | |
10296B-H3 | VGB6 | C57BL/6NTac | |
10296B-B12 | VGB6 | C57BL/6NTac | |