Gene | Krt15 |
Chromosome | 11 |
Deletion Start | 100,135,855 |
Deletion End | 100,131,997 |
Deletion Size | 3,859 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 100,135,412 | 100,135,432 | GATCGGGACTACAGCCATTAC |
TUP | 100,135,384 | 100,135,410 | TTAAGACCATGGAAGAGATCCGGGACA |
TUR | 100,135,348 | 100,135,367 | GAGCCACCTCCATCCATCTG |
TDF | 100,132,919 | 100,132,938 | CCACGAGCTGTGTTGTTGAG |
TDP | 100,132,891 | 100,132,918 | TGGAAAGAGACCTGAAGAGTCTGCAGTC |
TDR | 100,132,856 | 100,132,879 | GCAATCTACCCAAAGTACCCAAAC |
PCR Primers
Primer | Sequence |
SU | TGAGTTCTGTGGAGGTGTGC |
SD | TGAAGGAACAGCCGCCATAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 337 bp | - | + | + |
TUF | TUR | 85 bp | + | + | - |
TDF | TDR | 83 bp | + | + | - |
NeoFwd | SD | 307 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10386A-C4 | VGB6 | C57BL/6NTac | |
10386A-C7 | VGB6 | C57BL/6NTac | |
10386A-D3 | VGB6 | C57BL/6NTac | |
10386A-G7 | VGB6 | C57BL/6NTac | |
10386A-G12 | VGB6 | C57BL/6NTac | |
10386A-F5 | VGB6 | C57BL/6NTac | |