| Gene | Pth2 |
| Chromosome | 7 |
| Deletion Start | 45,181,278 |
| Deletion End | 45,181,781 |
| Deletion Size | 504 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 45,181,328 | 45,181,347 | AGCGGCTGTTGCTGCTTTTG |
| TUP | 45,181,348 | 45,181,371 | CTGCTGCTACTGCTTGTGCCCTGG |
| TUR | 45,181,412 | 45,181,433 | CCTCACACCTACCTGAACACAC |
| TDF | 45,181,666 | 45,181,683 | CTGACGACGCGGCCTTTC |
| TDP | 45,181,697 | 45,181,715 | CCTGCTGGCCGCCCTGGAG |
| TDR | 45,181,735 | 45,181,756 | AGCAACAGCTTCTGCATGTAAG |
PCR Primers
| Primer | Sequence |
| SU | GCTTCTCATTACCGCTGGC |
| SD | CCAAAACAGAGCTGGATCAG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | 361 bp | - | + | + |
| TUF | TUR | 106 bp | + | + | - |
| TDF | TDR | 91 bp | + | + | - |
| NeoFwd | SD | 282 bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 10740A-A7 | VGB6 | C57BL/6NTac | |
| 10740A-A1 | VGB6 | C57BL/6NTac | |
| 10740A-A11 | VGB6 | C57BL/6NTac | |