Gene | Aqp12 |
Chromosome | 1 |
Deletion Start | 93,006,386 |
Deletion End | 93,012,209 |
Deletion Size | 5,824 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 1
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 93,006,941 | 93,006,958 | TGCAGCACAGCCTTCTTG |
TUP | 93,006,961 | 93,006,980 | TACAGGGTGCCTGCCCTGGC |
TUR | 93,006,992 | 93,007,013 | TTACCTGTGTAGGCCATGAGAG |
TDF | 93,011,865 | 93,011,884 | GGAGAGGTGCAGCCAGAAAG |
TDP | 93,011,885 | 93,011,907 | AGCCAGACCCGCACTCAGGTAGG |
TDR | 93,011,919 | 93,011,940 | GAACGTAAACTGTCACCCAGGT |
PCR Primers
Primer | Sequence |
SU | TGGGGAAGACGCCAAGCAG |
SD | GCCAGGTTATCACGACCTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 323 bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 76 bp | + | + | - |
NeoFwd | SD | 288 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10817A-C4 | VGB6 | C57BL/6NTac | |
10817A-C11 | VGB6 | C57BL/6NTac | |
10817A-E10 | VGB6 | C57BL/6NTac | |
10817A-F7 | VGB6 | C57BL/6NTac | |