Gene | Tex24 |
Chromosome | 8 |
Deletion Start | 27,344,449 |
Deletion End | 27,345,919 |
Deletion Size | 1,471 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 27,344,769 | 27,344,791 | TAAGGGCGAATCTGTGATCAAAG |
TUP | 27,344,794 | 27,344,819 | CCCGAGGACAGGCAGACATTTGTTGG |
TUR | 27,344,877 | 27,344,898 | AAGCAACTCCATTGTCCTCTTC |
TDF | 27,345,615 | 27,345,638 | CAGTAGTCAGGCATGTCAGTATGG |
TDP | 27,345,639 | 27,345,660 | CACCATCTGCCCGTGGACACCA |
TDR | 27,345,735 | 27,345,758 | CCCAGAAGCTGAATGGTCTCTATG |
PCR Primers
Primer | Sequence |
SU | TGTGAAAGTCATATAGATAG |
SD | TGCAAGGGTACAAGATATGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 130 bp | + | + | - |
TDF | TDR | 144 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10892A-B10 | VGB6 | C57BL/6NTac | |
10892A-H10 | VGB6 | C57BL/6NTac | |
10892A-D11 | VGB6 | C57BL/6NTac | |
10892A-E12 | VGB6 | C57BL/6NTac | |