11009   Sprn     Status: ES cell colonies screened / QC positives

GeneSprn
Chromosome7
Deletion Start140,153,654
Deletion End140,153,212
Deletion Size443
Genome Build38
MGI IDMGI:3582583
NCBI Gene ID212518
BAC ID387I18
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 7

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUFGCCGCCTTCCTCTGTGA
TUP140,153,552140,153,571AGGCGCTCGAGGCAGTGCCC
TURCGCAGAGAGGAGCCGTA
TDF140,153,354140,153,374GCCTGGAGGACGATGAGAATG
TDP140,153,327140,153,350CAATGGGAGGCAACGGAACCGACC
TDR140,153,302140,153,321CAGGCCCAGTAGCTGTAGAC

PCR Primers

PrimerSequence
SUCAGAGACTCGTGTGCAGAGC
SDGCATTGTTCATGTCCTCGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TDFTDR73 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11009A-A6VGB6C57BL/6NTac
11009A-B1VGB6C57BL/6NTac
11009A-C4VGB6C57BL/6NTac
11009A-C12VGB6C57BL/6NTac
11009A-F5VGB6C57BL/6NTac
11009A-G11VGB6C57BL/6NTac