Gene | Wdr5b |
Chromosome | 16 |
Deletion Start | 36,041,495 |
Deletion End | 36,042,500 |
Deletion Size | 1,006 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 16
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 36,041,572 | 36,041,591 | CGAGGAAGAGCCGCAGAAAC |
TUP | 36,041,592 | 36,041,621 | CCAACTATGCTCTCAGACTTACTCTTGCGG |
TUR | 36,041,624 | 36,041,643 | GATGATATGGCCGCCGAGTG |
TDF | 36,042,059 | 36,042,081 | GGGAGCTATGATGGGCTTTGTAG |
TDP | 36,042,082 | 36,042,106 | AATTTGGGATGCTGCGTCAGGCCAG |
TDR | 36,042,117 | 36,042,137 | GGTTGCCTTCATCAGCAAGTG |
PCR Primers
Primer | Sequence |
SU | GATCACTGTGATCCGTGATG |
SD | TGAGCACAGGAGATTCCTAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 301 bp | - | + | + |
TUF | TUR | 72 bp | + | + | - |
TDF | TDR | 79 bp | + | + | - |
NeoFwd | SD | 278 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11435A-B5 | VGB6 | C57BL/6NTac | |
11435A-D9 | VGB6 | C57BL/6NTac | |
11435A-D10 | VGB6 | C57BL/6NTac | |