| Gene | Rcbtb1 |
| Chromosome | 14 |
| Deletion Start | 59,209,953 |
| Deletion End | 59,230,534 |
| Deletion Size | 20,582 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 14
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 59,210,023 | 59,210,046 | GGATCTATCAGGAAAGCATGTGTC |
| TUP | 59,210,049 | 59,210,071 | TGGTACCTCTGCCAATGAGGCGA |
| TUR | 59,210,089 | 59,210,109 | TGCTTCCGGTCTTACCTCATC |
| TDF | 59,230,333 | 59,230,352 | GCCATGAAATGCCCGTGTTG |
| TDP | 59,230,355 | 59,230,376 | AGTCCCAGCGTCCCAGCACTGC |
| TDR | 59,230,441 | 59,230,463 | GACAAAGCCTCTTCAGTCTGTTC |
PCR Primers
| Primer | Sequence |
| SU | GCATACAGCTGTTTCTAGAATG |
| SD | GCTGAGTCCAGCACTGTAC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | 381 bp | - | + | + |
| TUF | TUR | 87 bp | + | + | - |
| TDF | TDR | 131 bp | + | + | - |
| NeoFwd | SD | 315 bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 11554B-B1 | VGB6 | C57BL/6NTac | |
| 11554B-B12 | VGB6 | C57BL/6NTac | |
| 11554B-D4 | VGB6 | C57BL/6NTac | |
| 11554B-H2 | VGB6 | C57BL/6NTac | |