Gene | 0610037L13Rik |
Chromosome | 4 |
Deletion Start | 107,889,989 |
Deletion End | 107,896,959 |
Deletion Size | 6,971 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 107,890,771 | 107,890,789 | GCCCTAGAGGCCCAAACAG |
TUP | 107,890,794 | 107,890,817 | ACACCCTTCATCGTCCCAGGCTGT |
TUR | 107,890,838 | 107,890,857 | TGGGTATGTGAGGCACTGAG |
TDF | 107,896,151 | 107,896,171 | TGCTGACTGCAATTCCTCCAG |
TDP | 107,896,173 | 107,896,195 | ATGGTCACCACCAGGCGATCCCA |
TDR | 107,896,253 | 107,896,274 | TGTGACGTGGGCCTAAATGAAG |
PCR Primers
Primer | Sequence |
SU | AAGCAGCTGTCGCAGCGAC |
SD | GGATCAGGTACAGAATAGGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 268 bp | - | + | + |
TUF | TUR | 87 bp | + | + | - |
TDF | TDR | 124 bp | + | + | - |
NeoFwd | SD | 336 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11622A-B4 | VGB6 | C57BL/6NTac | |
11622A-D9 | VGB6 | C57BL/6NTac | |
11622A-C2 | VGB6 | C57BL/6NTac | |