| Gene | Mrpl51 |
| Chromosome | 6 |
| Deletion Start | 125,192,358 |
| Deletion End | 125,193,424 |
| Deletion Size | 1,067 |
| Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 125,192,490 | 125,192,511 | TGATTCATGCTTCTGTCCTTCC |
| TUP | 125,192,512 | 125,192,534 | CTAGGCGTCCCACGGTTGGCCTT |
| TUR | 125,192,574 | 125,192,593 | GAGCCCTCTTCTCGTTCCAG |
| TDF | 125,192,959 | 125,192,980 | ACCGTGTACTGCTCAAGCAATG |
| TDP | 125,192,983 | 125,193,007 | TGCAGGTTCAGGGTGACTTCCTAGA |
| TDR | 125,193,014 | 125,193,035 | AAGGTTCACGACTGCCTGAAAG |
PCR Primers
| Primer | Sequence |
| SU | CAGCGGTTCCATTCTTCCAG |
| SD | CTTACACGAGGTGCCAGTG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 104 bp | + | + | - |
| TDF | TDR | 77 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 11729A-A7 | VGB6 | C57BL/6NTac | |
| 11729A-C10 | VGB6 | C57BL/6NTac | |
| 11729A-E5 | VGB6 | C57BL/6NTac | |
| 11729A-C12 | VGB6 | C57BL/6NTac | |