11995   Aip     Status: Germline transmission achieved

GeneAip
Chromosome19
Deletion Start4,121,380
Deletion End4,114,482
Deletion Size6,899
Genome Build38
MGI IDMGI:109622
NCBI Gene ID11632
BAC ID333M10
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 19

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF4,121,3634,121,383ATACAGGAGGGCCGAGGAGAG
TUP4,121,3404,121,362TTGCCGGACTTTCAGGATGGCAC
TUR4,121,2944,121,315CAGAAGAGACGCTGGGAAAGTG
TDF4,115,1184,115,142GGTGGCTCAGGAGTATTATGAAGTG
TDP4,115,0934,115,116TGGATCACTGCTCCTCCATCCTCA
TDR4,115,0354,115,053GGATGGGAAGAGGCCAGTC

PCR Primers

PrimerSequence
SUAGCCAACTAAGCACAACTGG
SDCTAGGCTGGTATTGGCCAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR90 bp++-
TDFTDR108 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11995A-A1VGB6C57BL/6NTac
11995A-B6VGB6C57BL/6NTac
11995A-C3VGB6C57BL/6NTac
11995A-E1VGB6C57BL/6NTac
11995A-E3VGB6C57BL/6NTac
11995A-E6VGB6C57BL/6NTac