Gene | Treml2 |
Chromosome | 17 |
Deletion Start | 48,300,530 |
Deletion End | 48,309,516 |
Deletion Size | 8,987 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 48,301,086 | 48,301,108 | ACCGCTTACCACTTCCTGTTCTG |
TUP | 48,301,109 | 48,301,134 | TTCTGGCTAGAGTAAGGGCTGGCAAA |
TUR | 48,301,169 | 48,301,188 | GGGTCCCAGGTTCGTTTGTG |
TDF | 48,308,571 | 48,308,592 | GCAGCTCCTCAGATACTCACTC |
TDP | 48,308,594 | 48,308,622 | AGGCCAAGGGAAAGTGACATGCTAACTCC |
TDR | 48,308,663 | 48,308,680 | GGCCTGCACACTCCTTTG |
PCR Primers
Primer | Sequence |
SU | TGCCTGAAGTTCTGAGGAAG |
SD | CCTCCACGAGTTCATCATTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 103 bp | + | + | - |
TDF | TDR | 110 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12125A-G12 | VGB6 | C57BL/6NTac | |
12125A-C8 | VGB6 | C57BL/6NTac | |