Gene | Gas6 |
Chromosome | 8 |
Deletion Start | 13,494,207 |
Deletion End | 13,465,568 |
Deletion Size | 28,640 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 13,494,034 | 13,494,053 | CCGAGTGGGTGTAGGTTGAC |
TUP | 13,494,007 | 13,494,030 | ACACCCTTCTTTCTGCAGCTGTGC |
TUR | 13,493,931 | 13,493,950 | TTGGCCTCCTCGAAGACTTG |
TDF | 13,466,317 | 13,466,334 | CTGCCCTTCGCACACTTC |
TDP | 13,466,291 | 13,466,315 | ACCAGAAGCTAGCAAGAGCAGCCAA |
TDR | 13,466,257 | 13,466,276 | CACCTGTGGGCCTGTGTAAG |
PCR Primers
Primer | Sequence |
SU | CCAGATACAATTCTCCTTTC |
SD | GAGTCAGAAAGAAGCATGTAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 123 bp | + | + | - |
TDF | TDR | 78 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12128A-A11 | VGB6 | C57BL/6NTac | |
12128A-C2 | VGB6 | C57BL/6NTac | |
12128A-H3 | VGB6 | C57BL/6NTac | |
12128A-E3 | VGB6 | C57BL/6NTac | |
12128A-F2 | VGB6 | C57BL/6NTac | |