Gene | Fgfr1 |
Chromosome | 8 |
Deletion Start | 25,555,513 |
Deletion End | 25,573,922 |
Deletion Size | 18,410 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 25,555,709 | 25,555,727 | TCTACGCTTGCGTGACCAG |
TUP | 25,555,733 | 25,555,758 | CCTCTGGCAGCGATACCACCTACTTC |
TUR | 25,555,783 | 25,555,802 | GGATAGGGCAGAGGGCATTG |
TDF | 25,573,324 | 25,573,341 | GGCAAGCTGGGTTGGATG |
TDP | 25,573,347 | 25,573,370 | ACAGCTTCCTCAGGTGATGGTGGC |
TDR | 25,573,406 | 25,573,426 | CACCATGCTCCTGCTTCCTTC |
PCR Primers
Primer | Sequence |
SU | CCTGATAGAGCCATCTGAAC |
SD | TGCACACCTCCAAGCAGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 94 bp | + | + | - |
TDF | TDR | 103 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12134A-H1 | VGB6 | C57BL/6NTac | |
12134A-F2 | VGB6 | C57BL/6NTac | |
12134A-B4 | VGB6 | C57BL/6NTac | |