Gene | Slc27a2 |
Chromosome | 2 |
Deletion Start | 126,553,158 |
Deletion End | 126,587,943 |
Deletion Size | 34,786 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 126,553,508 | 126,553,526 | GTGGATCTGGCTGGGACTG |
TUP | 126,553,529 | 126,553,550 | CAAACTGGGCTGTCCCATGGCG |
TUR | 126,553,559 | 126,553,581 | GAGACTTGGCACGAATGTTGTAG |
TDF | 126,587,222 | 126,587,241 | CTTCCACCAGAGCCAGGATG |
TDP | 126,587,244 | 126,587,266 | CCACCTGAAGCCTTGCTAGTGCC |
TDR | 126,587,285 | 126,587,304 | TGCCAACAGTGTGCAAAGAG |
PCR Primers
Primer | Sequence |
SU | GCGGAGAACTAGATCTCATC |
SD | CCTCTCTCCAAGAAGCTTAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 74 bp | + | + | - |
TDF | TDR | 83 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12140A-A7 | VGB6 | C57BL/6NTac | |
12140A-D9 | VGB6 | C57BL/6NTac | |
12140A-H10 | VGB6 | C57BL/6NTac | |
12140A-G11 | VGB6 | C57BL/6NTac | |
12140A-G3 | VGB6 | C57BL/6NTac | |
12140A-D11 | VGB6 | C57BL/6NTac | |