12166   Accn3     Status: ES cell clone microinjected

GeneAccn3
Chromosome5
Deletion Start24,413,715
Deletion End24,417,765
Deletion Size4,051
Genome Build38
MGI IDMGI:2159339
NCBI Gene ID0
BAC ID329N20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF24,413,94924,413,968CGTGAGAGCCACCAGCTTAC
TUP24,413,97024,413,997TTCCCAGCTGTCACTTTGTGTAACATCA
TUR24,414,01124,414,030CATTGGGTGTGAGGCGTGAG
TDF24,417,43424,417,456GGCCCAGGAGCTATAAGTACAAC
TDP24,417,46224,417,482TGGCTGGTCTCCACCTGACCC
TDR24,417,48324,417,501CCTGGAGCTGTGGGAAGAG

PCR Primers

PrimerSequence
SUTGGTCTTTACTGCAGAGACC
SDCTCATCAACTCCTCACTAAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR82 bp++-
TDFTDR68 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12166A-A1VGB6C57BL/6NTac
12166A-B6VGB6C57BL/6NTac
12166A-E8VGB6C57BL/6NTac
12166A-E5VGB6C57BL/6NTac
12166A-F7VGB6C57BL/6NTac
12166A-G4VGB6C57BL/6NTac