12277   Sema4c     Status: Cancelled

GeneSema4c
Chromosome1
Deletion Start36,556,037
Deletion End36,549,477
Deletion Size6,561
Genome Build38
MGI IDMGI:109252
NCBI Gene ID20353
BAC ID296C20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 1

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF36,555,35936,555,381AGGAGACAGAGTGAACCAGACAG
TUP36,555,33536,555,358CTCTCCTTTGCTTTCGCGCACACC
TUR36,555,28636,555,307CCCAGGAGCACAGAGATGATAC
TDF36,549,71836,549,738AGCCTCTGCCTTCTCCAACTC
TDP36,549,68436,549,710CCTAGGAGGTGGTCGGAACTCAAATGC
TDR36,549,65736,549,679CCCAACTGTAAACGCACATAACC

PCR Primers

PrimerSequence
SUCTTTAAGGCCAGAAGGAGCC
SDGCTCCAAAGACTCAACCAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR96 bp++-
TDFTDR82 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12277A-B9VGB6C57BL/6NTac
12277A-D5VGB6C57BL/6NTac
12277A-D7VGB6C57BL/6NTac
12277A-F1VGB6C57BL/6NTac
12277A-G5VGB6C57BL/6NTac
12277A-H2VGB6C57BL/6NTac