12295   Ccdc160     Status: ES cell colonies screened / QC positives

GeneCcdc160
ChromosomeX
Deletion Start52,798,086
Deletion End52,799,076
Deletion Size991
Genome Build38
MGI IDMGI:3588225
NCBI Gene ID434778
BAC ID331L8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome X

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF52,798,19452,798,214GCAGACAACCACAAGAGGATG
TUP52,798,22752,798,256AACTTCTCCGTTAGGAACACTCAAGAAGGA
TUR52,798,27552,798,298TTCTGCTATCTGGGAAGAATAGTC
TDF52,798,91752,798,938GCCATCAAGAATGAGCTGAGAG
TDP52,798,93952,798,965TCGAGAAGACCCTAAGGGTGAAGAACA
TDR52,798,97452,798,993TGTCTTCCAAGCACCTCCAG

PCR Primers

PrimerSequence
SUTTTCTGTGCATACAGGTGCC
SDACAAGGTCACACAGTGCTGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR105 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12295A-D3VGB6C57BL/6NTac
12295B-G9VGB6C57BL/6NTac
12295C-B8VGB6C57BL/6NTac