Gene | Bmp2 |
Chromosome | 2 |
Deletion Start | 133,554,429 |
Deletion End | 133,554,764 |
Deletion Size | 336 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 133,554,532 | 133,554,550 | CATCCAGCCGACCCTTGTC |
TUP | 133,554,552 | 133,554,573 | CGGCCTTCGGAAGACGTCCTCA |
TUR | 133,554,582 | 133,554,603 | ACATGCTGAGCAGCCTCAACTC |
TDF | 133,554,664 | 133,554,684 | ATCTGTACCGCAGGCACTCAG |
TDP | 133,554,692 | 133,554,710 | AGGAGCGCCCGCCCCAGAC |
TDR | 133,554,759 | 133,554,777 | CCCGCTCACCTTCGTGATG |
PCR Primers
Primer | Sequence |
SU | TTTGTCAGGGATGCAGTGTC |
SD | GCATGCTGTGCTGACTAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 72 bp | + | + | - |
TDF | TDR | 114 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12406A-C11 | VGB6 | C57BL/6NTac | |
12406A-H3 | VGB6 | C57BL/6NTac | |
12406A-F11 | VGB6 | C57BL/6NTac | |