12591   Cdcp1     Status: Germline transmission achieved

GeneCdcp1
Chromosome9
Deletion Start123,190,119
Deletion End123,173,432
Deletion Size16,688
Genome Build38
MGI IDMGI:2442010
NCBI Gene ID109332
BAC ID27D5
BAC LibrarybMQ
CassetteTM-ZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF123,189,759123,189,779CAGCTCCCTAAGATGGCTCTC
TUP123,189,721123,189,741CCGGCCCATGTGCTTCCCAGA
TUR123,189,703123,189,720TCTGGTCTGCCTGGGTTC
TDF123,173,938123,173,959TCCTCATTCTGTTGTGCCATTC
TDP123,173,906123,173,934ACAAACAGGAAGAAGGTGGATAAGGGTCC
TDR123,173,810123,173,832GCATACACATGGGAGTCATTGTC

PCR Primers

PrimerSequence
SUCTGATTTCCTACTCCCACTC
SDGTGAGAGCAGAGACCTCAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR77 bp++-
TDFTDR150 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12591B-B10VGB6C57BL/6NTac
12591D-B3VGB6C57BL/6NTac
12591D-B9VGB6C57BL/6NTac