Gene | 9530003J23Rik |
Chromosome | 10 |
Deletion Start | 117,238,577 |
Deletion End | 117,234,357 |
Deletion Size | 4,221 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 117,238,524 | 117,238,543 | TCCTGCTCTCCATCACCATC |
TUP | 117,238,498 | 117,238,523 | CAGGGCAAGGTCTACGACCGATGTTC |
TUR | 117,238,457 | 117,238,477 | GGAAACCAGCTAGACCAAGAC |
TDF | 117,234,831 | 117,234,851 | TCTGTCCTGTGCTCTACTGAG |
TDP | 117,234,807 | 117,234,828 | TGTCAGGAGGCGCAAGGCTCTT |
TDR | 117,234,770 | 117,234,793 | CAGGTACATCCAGAAAGCAGTAAC |
PCR Primers
Primer | Sequence |
SU | CTAGCTCCCGGTTCTTTGTG |
SD | TGACGAAGGCCTCAGATACC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 87 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12664A-A2 | VGB6 | C57BL/6NTac | |
12664A-E3 | VGB6 | C57BL/6NTac | |
12664A-G2 | VGB6 | C57BL/6NTac | |
12664A-G6 | VGB6 | C57BL/6NTac | |