Gene | Mcart1 |
Chromosome | 4 |
Deletion Start | 45,400,134 |
Deletion End | 45,398,671 |
Deletion Size | 1,464 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 45,399,912 | 45,399,931 | CCTGCAGCTGAGGAAGGATG |
TUP | 45,399,889 | 45,399,909 | TTCCGCAACTTGTACCGCGGA |
TUR | 45,399,825 | 45,399,851 | GGTCCTCATACAGACCAAACATAAGTG |
TDF | 45,398,938 | 45,398,959 | GGCATCTCAGGCTCATTCTCAC |
TDP | 45,398,904 | 45,398,930 | ACTTTGTCTCTGCTCTTAAGAGGGCCA |
TDR | | | TGGCACCTCTGCTCCAG |
PCR Primers
Primer | Sequence |
SU | GAGTTGAAGGCTATCCTGGG |
SD | CTGTAGCACTGAGAAACCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 107 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12738A-A3 | VGB6 | C57BL/6NTac | |
12738A-H3 | VGB6 | C57BL/6NTac | |