Gene | Fam122a |
Chromosome | 19 |
Deletion Start | 24,477,353 |
Deletion End | 24,476,414 |
Deletion Size | 940 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 24,477,033 | 24,477,051 | CGAGGTGCAGACCGCAATG |
TUP | 24,477,002 | 24,477,027 | AAGCCACTCCTGGGAGGAAAGTTTCA |
TUR | 24,476,980 | 24,476,999 | TCCACGTCGTTGTCACTCAG |
TDF | 24,476,818 | 24,476,836 | GCCCAACCACCCGATTTAC |
TDP | 24,476,794 | 24,476,817 | CACCCGGAGAAGCCAGAGTCCCAT |
TDR | 24,476,754 | 24,476,776 | TCTTTTCAATGGTCCAAGAACAC |
PCR Primers
Primer | Sequence |
SU | CTTTCTGAGCTCACACTTGC |
SD | TTAGTGTGCCATGAACTATGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 72 bp | + | + | - |
TDF | TDR | 83 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12869A-A4 | VGB6 | C57BL/6NTac | |
12869A-A6 | VGB6 | C57BL/6NTac | |
12869A-C7 | VGB6 | C57BL/6NTac | |
12869A-G6 | VGB6 | C57BL/6NTac | |