Gene | 2310009B15Rik |
Chromosome | 1 |
Deletion Start | 138,856,814 |
Deletion End | 138,851,816 |
Deletion Size | 4,999 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 1
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 138,856,779 | 138,856,796 | ACGCTGGCGAGGGTATCG |
TUP | 138,856,759 | 138,856,778 | CTTGGGAGGCCACCGCCTCG |
TUR | 138,856,714 | 138,856,732 | GTCGAACCGAGGGTTGAGT |
TDF | 138,852,502 | 138,852,525 | ACAGTGTTCTGAAAGTCAGCCTTC |
TDP | 138,852,473 | 138,852,496 | TGTGCAGTCTCCTGGCTATGCCAG |
TDR | 138,852,425 | 138,852,447 | GGTGTGAGATTGACATGATGCTC |
PCR Primers
Primer | Sequence |
SU | TGCAGAATACGATCTAGCTTG |
SD | AGGTTCAAAGGCAGGTTTGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 101 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12876A-B3 | VGB6 | C57BL/6NTac | |
12876A-D2 | VGB6 | C57BL/6NTac | |
12876A-B8 | VGB6 | C57BL/6NTac | |
12876A-G12 | VGB6 | C57BL/6NTac | |