| Gene | Gpr87 |
| Chromosome | 3 |
| Deletion Start | 59,180,082 |
| Deletion End | 59,178,934 |
| Deletion Size | 1,149 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 59,180,003 | 59,180,022 | CACACTGCAAACAGCACAAG |
| TUP | 59,179,977 | 59,180,002 | TGAGGGACATGGGAAGAACTCTACCC |
| TUR | 59,179,936 | 59,179,957 | GTAAAGCACTGGCAGGATGATG |
| TDF | 59,179,067 | 59,179,087 | AACCAGGAGCGAAAGCATCAG |
| TDP | 59,179,042 | 59,179,064 | CGCTGCAAAGCGTCCGAAGATCA |
| TDR | 59,178,993 | 59,179,014 | TGGCCTCTAGTCCTTACACATC |
PCR Primers
| Primer | Sequence |
| SU | TTCTTTAAATCTTGGCAGCAG |
| SD | TCTTAGCCTTGCTCCCTCTG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 87 bp | + | + | - |
| TDF | TDR | 95 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 12911A-A5 | VGB6 | C57BL/6NTac | |
| 12911A-C5 | VGB6 | C57BL/6NTac | |
| 12911A-D6 | VGB6 | C57BL/6NTac | |
| 12911A-G3 | VGB6 | C57BL/6NTac | |