Gene | Uts2r |
Chromosome | 11 |
Deletion Start | 121,160,315 |
Deletion End | 121,161,492 |
Deletion Size | 1,178 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 121,160,377 | 121,160,398 | GCTTCCTGGTGGCTTTAATGTG |
TUP | 121,160,399 | 121,160,422 | TCCCACAACAGTTCCTGGACTGGC |
TUR | 121,160,424 | 121,160,443 | CAGGGAGCTGGGATCTGTTG |
TDF | 121,161,186 | 121,161,205 | AGACTGCACGCATCATCAAC |
TDP | 121,161,207 | 121,161,231 | ACCTGACTGCCTGCCTCACTTACGG |
TDR | 121,161,244 | 121,161,266 | GCAGAGTGTAGAGGAAGGGATTG |
PCR Primers
Primer | Sequence |
SU | GTTCTGCTGGAGGAGTGTCC |
SD | TGAGGCAGGACACACTTCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 67 bp | + | + | - |
TDF | TDR | 81 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12922A-B6 | VGB6 | C57BL/6NTac | |
12922A-F11 | VGB6 | C57BL/6NTac | |
12922A-F12 | VGB6 | C57BL/6NTac | |
12922A-H5 | VGB6 | C57BL/6NTac | |