Gene | Cd14 |
Chromosome | 18 |
Deletion Start | 36,726,488 |
Deletion End | 36,725,293 |
Deletion Size | 1,196 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 18
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 36,726,442 | 36,726,460 | GGAGCCAACCTGAGGAATC |
TUP | 36,726,418 | 36,726,440 | CAGGGTCTGGCAGGAGTCTCCCT |
TUR | 36,726,362 | 36,726,383 | CACCAGAAGCAACAGCAACAAG |
TDF | 36,725,600 | 36,725,618 | AGGCGCTCCGAGTTGTGAC |
TDP | 36,725,578 | 36,725,599 | TGGCCCAGTCAGCTAAACTCGC |
TDR | 36,725,554 | 36,725,576 | TCAGCCCAGTGAAAGACAGATTG |
PCR Primers
Primer | Sequence |
SU | ACAGAATGCCCTAATGCCAC |
SD | ATTTAGCACTGAGCCTGACC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 99 bp | + | + | - |
TDF | TDR | 65 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12982A-D1 | VGB6 | C57BL/6NTac | |
12982A-D11 | VGB6 | C57BL/6NTac | |
12982A-G2 | VGB6 | C57BL/6NTac | |
12982A-F9 | VGB6 | C57BL/6NTac | |