13022   Ptma     Status: ES cell colonies screened / QC positives

GenePtma
Chromosome1
Deletion Start86,526,909
Deletion End86,530,028
Deletion Size3,120
Genome Build38
MGI IDMGI:97803
NCBI Gene ID19231
BAC ID402C16
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 1

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF86,527,75686,527,775CCTCCCGGTGGAGTCTTCTC
TUP86,527,77986,527,800CCTCAGCCGTGTTCGGTTCGGA
TUR86,527,85586,527,875AACAAGGCGACTGGGACTGAG
TDF86,529,20086,529,221GAGGAGGCAGAGAATGGAAGAG
TDP86,529,22286,529,244ATGCACCTGCCAATGGGAACGCT
TDR86,529,24586,529,265CCCAGCTACTTGGACACTCAC

PCR Primers

PrimerSequence
SUTGTTCGGAATCGAGCCAATG
SDCTCTGAAGGCTGGTTTGGTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR120 bp++-
TDFTDR66 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13022A-A4VGB6C57BL/6NTac
13022A-H8VGB6C57BL/6NTac
13022A-E10VGB6C57BL/6NTac
13022A-C9VGB6C57BL/6NTac