13276   Cck     Status: ES cell colonies screened / QC positives

GeneCck
Chromosome9
Deletion Start121,494,527
Deletion End121,490,047
Deletion Size4,481
Genome Build38
MGI IDMGI:88297
NCBI Gene ID12424
BAC ID292B16
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF121,493,686121,493,704GCGCCTTGCCCTTTGAATG
TUP121,493,654121,493,683TCTTTCTGTGCCCAAACCTCTCATTGTAGA
TUR121,493,630121,493,648GGTTCGCTCTGCTCTCATC
TDF121,490,951121,490,972GACTCAGGAGTCTGCTCTCATC
TDP121,490,925121,490,948CCACTGTGAGGGTCCAAGGACTCA
TDR121,490,872121,490,893TCAGACAGCTCAGTGGGTAAAG

PCR Primers

PrimerSequence
SUCGTGTTTGTCTGTCCGTTTG
SDACAGGCCACCTTGCATTTAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR75 bp++-
TDFTDR101 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13276A-C12VGB6C57BL/6NTac
13276A-E2VGB6C57BL/6NTac
13276A-G1VGB6C57BL/6NTac
13276A-E4VGB6C57BL/6NTac
13276A-E3VGB6C57BL/6NTac