Gene | Fbxw5 |
Chromosome | 2 |
Deletion Start | 25,501,962 |
Deletion End | 25,505,022 |
Deletion Size | 3,061 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 25,502,812 | 25,502,831 | TTTGCTGTGCTGCCAGAGTG |
TUP | 25,502,843 | 25,502,871 | TAATTACCCTGCAGCCTTTCTGGAACAGA |
TUR | 25,502,876 | 25,502,897 | TGAGATGGTCAGGTCGTTGTTC |
TDF | 25,504,740 | 25,504,760 | GGACCGCCACTACAACATCTG |
TDP | 25,504,761 | 25,504,781 | CCTAGCCAAGCTGCGGCATGA |
TDR | 25,504,783 | 25,504,803 | AGCCACGGAGTTGACCACATC |
PCR Primers
Primer | Sequence |
SU | CAAGTCCTTTGGTGTCCTGG |
SD | CCAACTGTTTATTCAGGCCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 86 bp | + | + | - |
TDF | TDR | 64 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13499A-C3 | VGB6 | C57BL/6NTac | |
13499A-G2 | VGB6 | C57BL/6NTac | |
13499A-F12 | VGB6 | C57BL/6NTac | |
13499A-H1 | VGB6 | C57BL/6NTac | |
13499A-F7 | VGB6 | C57BL/6NTac | |