Gene | Slc52a2 |
Chromosome | 15 |
Deletion Start | 76,539,476 |
Deletion End | 76,541,168 |
Deletion Size | 1,693 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 76,540,238 | 76,540,258 | CCCGACATCTGAACCCACAAC |
TUP | 76,540,262 | 76,540,286 | TACAGGGCTTCGGGTAGAAACACCA |
TUR | 76,540,291 | 76,540,312 | TCCTCTTCCTCTTCCTCCTCTG |
TDF | 76,540,368 | 76,540,388 | CCAGACCCTAAGGCCCATCAG |
TDP | 76,540,390 | 76,540,413 | TGTTCTCTTCCCGAAGTGCCTGTC |
TDR | 76,540,441 | 76,540,460 | CAGCACGCCATTGGTCAGAG |
PCR Primers
Primer | Sequence |
SU | GACTGGCTCTTTCGCTCATC |
SD | CACTAGGCGAGTGGAGGAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 75 bp | + | + | - |
TDF | TDR | 93 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13532A-A6 | VGB6 | C57BL/6NTac | |
13532A-D11 | VGB6 | C57BL/6NTac | |
13532A-H9 | VGB6 | C57BL/6NTac | |
13532A-H6 | VGB6 | C57BL/6NTac | |
13532A-D2 | VGB6 | C57BL/6NTac | |