Gene | Hexim1 |
Chromosome | 11 |
Deletion Start | 103,116,925 |
Deletion End | 103,118,058 |
Deletion Size | 1,134 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 103,116,925 | 103,116,943 | GCCGAGCCACTCTTGACAG |
TUP | 103,116,948 | 103,116,976 | TCAACACCAGCCTCAAACTAGCAACTGTA |
TUR | 103,116,991 | 103,117,013 | TCAGAGGTATGCTCTTCATGGAC |
TDF | 103,117,683 | 103,117,701 | GGACGGCAGCGAGTTTCTG |
TDP | 103,117,702 | 103,117,726 | CAGCGGGACTTCTCGGAGACGTACG |
TDR | 103,117,776 | 103,117,797 | CTCCAGCTCCAGGTACTCTTTG |
PCR Primers
Primer | Sequence |
SU | TGCATATTTGCATACGGTGC |
SD | TTTGGCCACCTTATAGCTCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 89 bp | + | + | - |
TDF | TDR | 115 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13551A-H10 | VGB6 | C57BL/6NTac | |
13551A-H2 | VGB6 | C57BL/6NTac | |
13551A-G3 | VGB6 | C57BL/6NTac | |
13551A-G9 | VGB6 | C57BL/6NTac | |
13551A-G5 | VGB6 | C57BL/6NTac | |
13551A-A6 | VGB6 | C57BL/6NTac | |