Gene | Ramp2 |
Chromosome | 11 |
Deletion Start | 101,246,455 |
Deletion End | 101,248,160 |
Deletion Size | 1,706 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 101,246,655 | 101,246,674 | CCACCCTGCGAGTACCAATC |
TUP | 101,246,677 | 101,246,699 | CGTGCGGAGCACCTCTGAACTGC |
TUR | 101,246,709 | 101,246,731 | CGCCAACCCAGAGATGTATTCAG |
TDF | 101,247,693 | 101,247,714 | GGGCAGTGTTGAAGGATGGATG |
TDP | 101,247,717 | 101,247,740 | TCAGGCCAGGAGTTGGACCTGTTC |
TDR | 101,247,759 | 101,247,778 | TGGATGGGCACAGGGAGAAG |
PCR Primers
Primer | Sequence |
SU | CCCTGCCTCAGATACCCAG |
SD | TCCCACACCTTCCCAACTAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 77 bp | + | + | - |
TDF | TDR | 86 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13760A-H8 | VGB6 | C57BL/6NTac | |
13760A-A6 | VGB6 | C57BL/6NTac | |