Gene | Rpl10a |
Chromosome | 17 |
Deletion Start | 28,328,617 |
Deletion End | 28,331,065 |
Deletion Size | 2,449 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 28,329,008 | 28,329,028 | ACGACCCTCAGAAGGACAAAC |
TUP | 28,329,030 | 28,329,052 | TTTCTCGGGCACCGTCAGGTTGG |
TUR | 28,329,078 | 28,329,096 | AGGCCACACGGGAACACTG |
TDF | 28,330,261 | 28,330,282 | CCCTCAGTTCTATGCAGCACAC |
TDP | 28,330,283 | 28,330,309 | CAGGGATTGTGGGACATCCTGGTCTAA |
TDR | 28,330,315 | 28,330,334 | CCACCCTCAAGTCCTCACAG |
PCR Primers
Primer | Sequence |
SU | AGAAGATAGAAAGCAGGGAG |
SD | ACCTCTGTCACCCACAAAGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 89 bp | + | + | - |
TDF | TDR | 74 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13788A-A9 | VGB6 | C57BL/6NTac | |
13788A-C1 | VGB6 | C57BL/6NTac | |
13788A-C10 | VGB6 | C57BL/6NTac | |
13788A-F9 | VGB6 | C57BL/6NTac | |
13788A-E6 | VGB6 | C57BL/6NTac | |
13788A-D8 | VGB6 | C57BL/6NTac | |