Gene | Sap18 |
Chromosome | 14 |
Deletion Start | 57,798,286 |
Deletion End | 57,802,147 |
Deletion Size | 3,862 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 14
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 57,798,927 | 57,798,945 | GGTGTCAAAGCGTTTGGTG |
TUP | 57,798,955 | 57,798,977 | TGAGGACGGCTGTCCCAAGTGTT |
TUR | 57,798,979 | 57,798,999 | CAAGGCAGGTACTCGGAGATG |
TDF | 57,801,325 | 57,801,344 | GACACAGGTTGCCAGGATTG |
TDP | 57,801,348 | 57,801,372 | AGCAAACTGACTTCCCTGCCAGGCC |
TDR | 57,801,380 | 57,801,402 | CCAGTGCTGCACACTATATGATG |
PCR Primers
Primer | Sequence |
SU | TACGTTAAGCTGACCTGGGC |
SD | TGCCACAAACATATTCACCAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 78 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13810A-B12 | VGB6 | C57BL/6NTac | |
13810A-A1 | VGB6 | C57BL/6NTac | |
13810A-F7 | VGB6 | C57BL/6NTac | |
13810A-E10 | VGB6 | C57BL/6NTac | |
13810A-E4 | VGB6 | C57BL/6NTac | |
13810A-D3 | VGB6 | C57BL/6NTac | |