| Gene | Slc25a35 |
| Chromosome | 11 |
| Deletion Start | 68,968,666 |
| Deletion End | 68,972,146 |
| Deletion Size | 3,481 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 68,968,867 | 68,968,887 | GCGCTCTTGTACCAGTTCTTG |
| TUP | 68,968,889 | 68,968,912 | TGAATGGCATCCGACTGGGCACCT |
| TUR | 68,968,944 | 68,968,965 | ACTGTGGGTGCCTTCATTAGTG |
| TDF | 68,971,257 | 68,971,276 | GCCTGCCCAGAGTTGTCATC |
| TDP | 68,971,279 | 68,971,303 | CTCCTCTACCCAGCTGTGCACCTTC |
| TDR | 68,971,321 | 68,971,340 | GTACCTCCCACTGGCTCAAG |
PCR Primers
| Primer | Sequence |
| SU | CTTTCACAACCCTCCTCTCG |
| SD | TCTTTCTGCTTCTTCCCTGG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 99 bp | + | + | - |
| TDF | TDR | 84 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 13834A-A6 | VGB6 | C57BL/6NTac | |
| 13834A-A11 | VGB6 | C57BL/6NTac | |
| 13834A-G12 | VGB6 | C57BL/6NTac | |
| 13834A-D9 | VGB6 | C57BL/6NTac | |
| 13834A-G6 | VGB6 | C57BL/6NTac | |