Gene | Slc35e3 |
Chromosome | 10 |
Deletion Start | 117,746,183 |
Deletion End | 117,736,030 |
Deletion Size | 10,154 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 117,745,458 | 117,745,478 | GCGAAAGCTCAACCTGGAAAG |
TUP | 117,745,423 | 117,745,449 | ATCCCCAGGAAATCGAACCAGAAGTGA |
TUR | 117,745,368 | 117,745,389 | GTGTGCCACTGAAGGTGTATTC |
TDF | 117,736,644 | 117,736,667 | GCAGGTCCAACAGGAAAGAATAAG |
TDP | 117,736,618 | 117,736,643 | TATGGTGTTGGGCTCAGCAGTCAAGA |
TDR | 117,736,596 | 117,736,616 | CCTCTGTAAGAGCAGGGTGTG |
PCR Primers
Primer | Sequence |
SU | GCTCAGCAACGTGGAGAGT |
SD | TCATTCCTATGGAGCCGAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 111 bp | + | + | - |
TDF | TDR | 72 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13837A-E7 | VGB6 | C57BL/6NTac | |
13837A-D3 | VGB6 | C57BL/6NTac | |