| Gene | Zdhhc12 |
| Chromosome | 2 |
| Deletion Start | 30,093,585 |
| Deletion End | 30,091,159 |
| Deletion Size | 2,427 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 30,093,086 | 30,093,109 | CCCAAATCCTATGAGCCGACTAAC |
| TUP | 30,093,060 | 30,093,082 | CCCAAGGGACGCCACTATAGCGA |
| TUR | 30,093,034 | 30,093,052 | CCAGGCGAAGGTGGGAAAC |
| TDF | 30,092,045 | 30,092,063 | CGAGCCCAAGGAGGAACAG |
| TDP | 30,092,021 | 30,092,043 | CAGCCATGGTTCCTCAGGCCGTC |
| TDR | 30,091,983 | 30,092,002 | CCTACCAGCACCAGACAGTG |
PCR Primers
| Primer | Sequence |
| SU | ATCAAAGATGGGCACGCATG |
| SD | AGCCTCCACGTAACCATGTG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 76 bp | + | + | - |
| TDF | TDR | 81 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 13951A-A2 | VGB6 | C57BL/6NTac | |
| 13951A-D8 | VGB6 | C57BL/6NTac | |
| 13951A-H6 | VGB6 | C57BL/6NTac | |
| 13951A-D11 | VGB6 | C57BL/6NTac | |