Gene | 1700016D06Rik |
Chromosome | 8 |
Deletion Start | 11,678,666 |
Deletion End | 11,655,541 |
Deletion Size | 23,126 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 11,678,548 | 11,678,567 | CCCAGGAGACTGGCAGATAG |
TUP | 11,678,517 | 11,678,543 | CTATAGGCACGATGAATCAGGCAGGCA |
TUR | 11,678,485 | 11,678,508 | GAGCCCTTTCAAACAATAGCAGAG |
TDF | 11,655,631 | 11,655,653 | CCAGCAAAGTAGAAGCAGTCAAC |
TDP | 11,655,595 | 11,655,622 | AAGCCAATCCAGCCCTAAGTACTAGGCC |
TDR | 11,655,572 | 11,655,590 | GCAGTGGCTTGTCCCTCTC |
PCR Primers
Primer | Sequence |
SU | TGGAAGGAGATATGATGGGC |
SD | ACAGACAAGGGAAGGTGCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14011A-D3 | VGB6 | C57BL/6NTac | |
14011A-F12 | VGB6 | C57BL/6NTac | |
14011A-E8 | VGB6 | C57BL/6NTac | |
14011A-F4 | VGB6 | C57BL/6NTac | |