| Gene | Trpm4 |
| Chromosome | 7 |
| Deletion Start | 45,333,707 |
| Deletion End | 45,303,664 |
| Deletion Size | 30,044 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 45,332,896 | 45,332,913 | TAGGGCTGCGCTTGTCAC |
| TUP | 45,332,871 | 45,332,895 | CTGGGCACAGAACAGCTCCTCCCTT |
| TUR | 45,332,810 | 45,332,831 | GATGGGCAGAGTTCCAGAAATG |
| TDF | 45,304,057 | 45,304,077 | GCCAAAGAAACGCACCAGAAG |
| TDP | 45,304,028 | 45,304,051 | AACAACGCTGTTCGCTGGACCACA |
| TDR | 45,303,985 | 45,304,008 | GGAGTCCTGAACTGTTTGCTGAAG |
PCR Primers
| Primer | Sequence |
| SU | CTCTGCTTCCTTCGTTCCTC |
| SD | CAACATCACACACCTGCTCC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 104 bp | + | + | - |
| TDF | TDR | 93 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 14308A-B10 | VGB6 | C57BL/6NTac | |
| 14308A-C2 | VGB6 | C57BL/6NTac | |
| 14308A-G9 | VGB6 | C57BL/6NTac | |
| 14308A-H7 | VGB6 | C57BL/6NTac | |