Gene | 4930404N11Rik |
Chromosome | 10 |
Deletion Start | 81,365,783 |
Deletion End | 81,364,064 |
Deletion Size | 1,720 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 81,365,122 | 81,365,142 | AGGGCCATTCTCGGCTACAAG |
TUP | 81,365,094 | 81,365,119 | ATAGACTGCAGGTGGGAAAGTGCACA |
TUR | 81,365,052 | 81,365,071 | CAAGGTGCTGGGTGAGAGTC |
TDF | 81,364,850 | 81,364,869 | CGGCCTGACCAACTCAGAAC |
TDP | 81,364,825 | 81,364,849 | CTGGTGATGCCTGGTACAAGCTGCC |
TDR | 81,364,754 | 81,364,773 | CACGCTGGCGACTCTGAAAG |
PCR Primers
Primer | Sequence |
SU | AAACAGGAACCCAAGTGGAG |
SD | CAACCGTGGGTCTCCATTAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 91 bp | + | + | - |
TDF | TDR | 116 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14607A-A1 | VGB6 | C57BL/6NTac | |
14607A-B3 | VGB6 | C57BL/6NTac | |
14607A-D9 | VGB6 | C57BL/6NTac | |
14607A-E8 | VGB6 | C57BL/6NTac | |
14607A-E11 | VGB6 | C57BL/6NTac | |
14607A-F12 | VGB6 | C57BL/6NTac | |