Gene | Ccdc134 |
Chromosome | 15 |
Deletion Start | 82,130,071 |
Deletion End | 82,141,033 |
Deletion Size | 10,963 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 82,130,830 | 82,130,850 | GCCCAGTCTCACACCACTAAC |
TUP | 82,130,853 | 82,130,876 | AGCCACACCTCCTAACCCTGTCGC |
TUR | 82,130,909 | 82,130,930 | CAGCATGGGAAGATGGGTAGAG |
TDF | 82,140,334 | 82,140,354 | GCAAAGGGTAGCTGGAGAAAG |
TDP | 82,140,356 | 82,140,380 | TTTGAGGCTGAAGTCACCCACATCC |
TDR | 82,140,387 | 82,140,407 | TGATGCTGGCAAGAAGAGATG |
PCR Primers
Primer | Sequence |
SU | ACATTGTTCAGACCTGTCGC |
SD | GTTCTGCAGAGAGCTGGACC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 101 bp | + | + | - |
TDF | TDR | 74 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14903A-A2 | VGB6 | C57BL/6NTac | |
14903A-A3 | VGB6 | C57BL/6NTac | |
14903A-G1 | VGB6 | C57BL/6NTac | |
14903A-G10 | VGB6 | C57BL/6NTac | |
14903A-D10 | VGB6 | C57BL/6NTac | |