Gene | Trpv2 |
Chromosome | 11 |
Deletion Start | 62,578,411 |
Deletion End | 62,600,224 |
Deletion Size | 21,814 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 62,579,234 | 62,579,257 | GGCTGGACTGATGGTGATAGAATG |
TUP | 62,579,262 | 62,579,289 | CCACAATGCCCTTTAGAATCCCAGTCGG |
TUR | 62,579,292 | 62,579,313 | AGACTAGGGAAGCACAGAAAGG |
TDF | 62,599,394 | 62,599,415 | CAGCAGGTAGTGTGCATGTAAC |
TDP | 62,599,421 | 62,599,444 | CCTTCACACCTAGACGTGGGCCCT |
TDR | 62,599,462 | 62,599,480 | GGCCAAGGGTCAGCATCAG |
PCR Primers
Primer | Sequence |
SU | TGACCTTGAACTTCTGATCCTC |
SD | TGGCTCTTAGAGACACATGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 80 bp | + | + | - |
TDF | TDR | 87 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15082A-A5 | VGB6 | C57BL/6NTac | |
15082A-D10 | VGB6 | C57BL/6NTac | |
15082A-G7 | VGB6 | C57BL/6NTac | |
15082A-A7 | VGB6 | C57BL/6NTac | |
15082A-C11 | VGB6 | C57BL/6NTac | |