Gene | Exosc2 |
Chromosome | 2 |
Deletion Start | 31,680,575 |
Deletion End | 31,670,743 |
Deletion Size | 9,833 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 31,670,984 | 31,671,004 | GACACATCGGAGCATCCATAC |
TUP | 31,671,006 | 31,671,029 | AGTTCCCTCCTTTGCGAGCCTCAC |
TUR | 31,671,058 | 31,671,079 | GGGAATCAGGAACTGACAAAGG |
TDF | 31,680,009 | 31,680,031 | GCTCCTGTGTTTCTTCAGTGTTC |
TDP | 31,680,032 | 31,680,059 | CACTTTGTTTCCCATAACCCAGGCAGGA |
TDR | 31,680,073 | 31,680,094 | TGGCAGGGACTCATTAAGGTTG |
PCR Primers
Primer | Sequence |
SU | TGACATCCAAACACCAAACC |
SD | TGCCATGTCTTTGTCTTTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 96 bp | + | + | - |
TDF | TDR | 86 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15278A-E12 | VGB6 | C57BL/6NTac | |
15278A-F1 | VGB6 | C57BL/6NTac | |
15278A-G9 | VGB6 | C57BL/6NTac | |
15278A-H9 | VGB6 | C57BL/6NTac | |